Ordino: A visual cancer analysis tool for ranking and exploring genes, cell lines and tissue samples

Marc Streit; Samuel Gratzl; Holger Stitz; Thomas Zichner; Andreas Wernitznig; Christian Haslinger

doi:10.1093/bioinformatics/btz009

Ordino: A visual cancer analysis tool for ranking and exploring genes, cell lines and tissue samples

Marc Streit
, Samuel Gratzl
, Holger Stitz
, Thomas Zichner
, Andreas Wernitznig
, Christian Haslinger

Institut für Computergrafik

Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung

Abstract

Ordino is a web-based analysis tool for cancer genomics that allows users to flexibly rank, filter and explore genes, cell lines and tissue samples based on pre-loaded data, including The Cancer Genome Atlas, the Cancer Cell Line Encyclopedia and manually uploaded information. Interactive tabular data visualization that facilitates the user-driven prioritization process forms a core component of Ordino. Detail views of selected items complement the exploration. Findings can be stored, shared and reproduced via the integrated session management.

Originalsprache	Englisch
Seiten (von - bis)	3140-3142
Seitenumfang	3
Fachzeitschrift	Bioinformatics
Volume	35
Ausgabenummer	17
DOIs	https://doi.org/10.1093/bioinformatics/btz009
Publikationsstatus	Veröffentlicht - Sep. 2019

UN SDGs

Dieser Output leistet einen Beitrag zu folgendem(n) Ziel(en) für nachhaltige Entwicklung

SDG 3 – Gute Gesundheit und Wohlergehen

Wissenschaftszweige

102 Informatik
102003 Bildverarbeitung
102008 Computergraphik
102015 Informationssysteme
102020 Medizinische Informatik
103021 Optik

JKU-Schwerpunkte

Digital Transformation

Zugriff auf Dokument

10.1093/bioinformatics/btz009

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